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 image segmentation


Probabilistic Attention for Interactive Segmentation

Neural Information Processing Systems

We provide a probabilistic interpretation of attention and show that the standard dotproduct attention in transformers is a special case of Maximum APosteriori (MAP) inference. The proposed approach suggests the use of Expectation Maximization algorithms for online adaptation of key and value model parameters. This approach is useful for cases in which external agents, e.g., annotators, provide inference-time information about the correct values of some tokens, e.g., the semantic category of some pixels, and we need for this new information to propagate to other tokens in a principled manner. We illustrate the approach on an interactive semantic segmentation task in which annotators and models collaborate online to improve annotation efficiency. Using standard benchmarks, we observe that key adaptation boosts model performance ( 10% mIoU) in the low feedback regime and value propagation improves model responsiveness in the high feedback regime.



AIMS: All-Inclusive Multi-Level Segmentation for Anything

Neural Information Processing Systems

Despite the progress of image segmentation for accurate visual entity segmentation, completing the diverse requirements of image editing applications for differentlevel region-of-interest selections remains unsolved. In this paper, we propose a new task, All-Inclusive Multi-Level Segmentation (AIMS), which segments visual regions into three levels: part, entity, and relation (two entities with some semantic relationships). We also build a unified AIMS model through multi-dataset multi-task training to address the two major challenges of annotation inconsistency and task correlation. Specifically, we propose task complementarity, association, and prompt mask encoder for three-level predictions. Extensive experiments demonstrate the effectiveness and generalization capacity of our method compared to other state-of-the-art methods on a single dataset or the concurrent work on segment anything. We will make our code and training model publicly available.



Coupled Segmentation and Edge Learning via Dynamic Graph Propagation

Neural Information Processing Systems

Image segmentation and edge detection are both central problems in perceptual grouping. It is therefore interesting to study how these two tasks can be coupled to benefit each other. Indeed, segmentation can be easily transformed into contour edges to guide edge learning. However, the converse is nontrivial since general edges may not always form closed contours. In this paper, we propose a principled end-to-end framework for coupled edge and segmentation learning, where edges are leveraged as pairwise similarity cues to guide segmentation.



Combinatorial Energy Learning for Image Segmentation

Neural Information Processing Systems

We introduce a new machine learning approach for image segmentation that uses a neural network to model the conditional energy of a segmentation given an image. Our approach, combinatorial energy learning for image segmentation (CELIS) places a particular emphasis on modeling the inherent combinatorial nature of dense image segmentation problems. We propose efficient algorithms for learning deep neural networks to model the energy function, and for local optimization of this energy in the space of supervoxel agglomerations. We extensively evaluate our method on a publicly available 3-D microscopy dataset with 25 billion voxels of ground truth data. On an 11 billion voxel test set, we find that our method improves volumetric reconstruction accuracy by more than 20% as compared to two state-of-the-art baseline methods: graph-based segmentation of the output of a 3-D convolutional neural network trained to predict boundaries, as well as a random forest classifier trained to agglomerate supervoxels that were generated by a 3-D convolutional neural network.


Combining Fully Convolutional and Recurrent Neural Networks for 3D Biomedical Image Segmentation

Neural Information Processing Systems

Segmentation of 3D images is a fundamental problem in biomedical image analysis. Deep learning (DL) approaches have achieved the state-of-the-art segmentation performance. To exploit the 3D contexts using neural networks, known DL segmentation methods, including 3D convolution, 2D convolution on the planes orthogonal to 2D slices, and LSTM in multiple directions, all suffer incompatibility with the highly anisotropic dimensions in common 3D biomedical images. In this paper, we propose a new DL framework for 3D image segmentation, based on a combination of a fully convolutional network (FCN) and a recurrent neural network (RNN), which are responsible for exploiting the intra-slice and inter-slice contexts, respectively. To our best knowledge, this is the first DL framework for 3D image segmentation that explicitly leverages 3D image anisotropism. Evaluating using a dataset from the ISBI Neuronal Structure Segmentation Challenge and in-house image stacks for 3D fungus segmentation, our approach achieves promising results, comparing to the known DL-based 3D segmentation approaches.


Combinatorial Energy Learning for Image Segmentation

Neural Information Processing Systems

We introduce a new machine learning approach for image segmentation that uses a neural network to model the conditional energy of a segmentation given an image. Our approach, combinatorial energy learning for image segmentation (CELIS) places a particular emphasis on modeling the inherent combinatorial nature of dense image segmentation problems. We propose efficient algorithms for learning deep neural networks to model the energy function, and for local optimization of this energy in the space of supervoxel agglomerations. We extensively evaluate our method on a publicly available 3-D microscopy dataset with 25 billion voxels of ground truth data. On an 11 billion voxel test set, we find that our method improves volumetric reconstruction accuracy by more than 20% as compared to two state-of-the-art baseline methods: graph-based segmentation of the output of a 3-D convolutional neural network trained to predict boundaries, as well as a random forest classifier trained to agglomerate supervoxels that were generated by a 3-D convolutional neural network.